Lesion Challenge

Reference: Longitudinal multiple sclerosis lesion segmentation: Resource and challenge
Carass A, Roy S, Jog A, Cuzzocreo JL, Magrath E, Gherman A, Button J, Nguyen J, Prados F, Sudre CH, Jorge Cardoso M, Cawley N, Ciccarelli O, Wheeler-Kingshott CA, Ourselin S, Catanese L, Deshpande H, Maurel P, Commowick O, Barillot C, Tomas-Fernandez X, Warfield SK, Vaidya S, Chunduru A, Muthuganapathy R, Krishnamurthi G, Jesson A, Arbel T, Maier O, Handels H, Iheme LO, Unay D, Jain S, Sima DM, Smeets D, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Bazin PL, Calabresi PA, Crainiceanu CM, Ellingsen LM, Reich DS, Prince JL, Pham DL.
Neuroimage. 2017 Mar 1;148:77-102. doi: 10.1016/j.neuroimage.2016.12.064. Epub 2017 Jan 11. (paper link)

The Longitudinal MS Lesion Segmentation Challenge was conducted at the 2015 International Symposium on Biomedical Imaging in New York, NY, April 16-19. Competing teams applied their automatic lesion segmentation algorithms to MR neuroimaging data acquired at multiple time points from MS patients. Algorithms were evaluated against manual segmentations from multiple raters in terms of their segmentation accuracy and ability to track lesion evolution.

This work was partially supported by funding from the National Institute of Neurological Disorders and Stroke (R01-NS070906) and the National Multiple Sclerosis Society (RG-1507-05243).

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RankSubmitted byAffiliationSubmission DateScoreDownload results
#1Chuanhu_WTABeijing University of Posts and Telecommunication10/16/2019 05:5493.392 download
#2embVanderbilt University12/12/2019 16:4093.358 download
#3embVanderbilt University12/12/2019 17:0793.352 download
#4embVanderbilt University12/12/2019 17:3693.305 download
#5focal_l2Vanderbilt University12/08/2019 20:5893.302 download
#6l2_3dVanderbilt University12/09/2019 22:1093.238 download
#7l2_focal_3dVanderbilt University12/09/2019 22:2493.219 download
#8vandy_submissionVanderbilt University03/03/2019 15:0793.21 download
#9focal_l2_diceVanderbilt University12/08/2019 23:0693.208 download
#10pred_expVanderbilt University05/14/2019 23:1193.189 download
#11vandy_submission1Vanderbilt University03/03/2019 15:2793.189 download
#12nnunet_allVanderbilt University12/12/2019 16:5393.176 download
#13vandy_focalVanderbilt University03/17/2019 21:3093.115 download
#14vandy_diceVanderbilt University03/21/2019 10:3893.108 download
#15vanilla_nnUNetGerman Cancer Research Center03/08/2019 04:4993.087 download
#16test_setGerman Cancer Research Center02/18/2019 09:4393.03 download
#17focal_3dVanderbilt University12/09/2019 22:4293.021 download
#18vandy_singleVanderbilt University03/22/2019 12:5392.953 download
#19vandy_focal_refinedVanderbilt University03/20/2019 21:2792.952 download
#20nnUNetV2German Cancer Research Center12/03/2019 09:0392.874 download
#21vandy_focal2Vanderbilt University03/20/2019 21:0492.847 download
#22WTA_CABBeijing University of Posts and Telecommunications04/23/2019 07:0492.648 download
#23WTA_submission1Beijing University of Posts and Telecommunications04/28/2019 05:0492.637 download
#24Chuanhu_WTABeijing University of Posts and Telecommunication10/16/2019 07:1092.618 download
#25WTA_submissionBeijing University of Posts and Telecommunications04/28/2019 04:3692.611 download
#26WTA_V1Beijing University of Posts and Telecommunications04/28/2019 06:0992.593 download
#27WTA_submissionBeijing University of Posts and Telecommunications04/28/2019 04:4192.57 download
#28Chuanhu_WTABeijing University of Posts and Telecommunication10/18/2019 13:5392.534 download
#29WTABeijing University of Posts and Telecommunications04/07/2019 03:2292.494 download
#30IMAGINE_2Boston Children's Hospital06/19/2018 16:4892.486 download
#31WTA_submissionBeijing University of Posts and Telecommunications06/22/2019 22:2692.451 download
#32test_uvaUVA01/17/2019 12:3992.405 download
#33dropUNetUVA10/03/2018 11:0392.405 download
#34UNet_v3UVA08/23/2018 09:3892.402 download
#35uva_unetUVA08/19/2018 17:4292.344 download
#36DuNetUVA08/22/2018 09:5292.327 download
#37testtest10/31/2018 01:5592.227 download
#38WTA_submission1Beijing University of Posts and Telecommunications04/28/2019 05:0992.213 download
#39WTA_CABBeijing University of Posts and Telecommunications04/23/2019 07:1092.189 download
#40UnigeUniversity of Genova10/31/2018 01:4592.184 download
#41vandy_test_4Vanderbilt University02/18/2019 22:5992.167 download
#42vandy_test_3Vanderbilt University02/18/2019 21:5692.144 download
#43vandy_testVanderbilt University02/18/2019 21:0892.138 download
#44UnigeUniversity of Genova10/31/2018 04:0392.118 download
#45vandy_test_2Vanderbilt University02/18/2019 21:4392.112 download
#46PAVISIstituto Italiano di Tecnologia09/25/2018 14:3492.108 download
#47vandy_test_5Vanderbilt University02/21/2019 13:5692.106 download
#48Chuanhu_TWABeijing University of Posts and Telecommunication06/11/2019 00:5592.099 download
#493DAttn_UNetBeijing University of Posts and Telecommunication10/18/2019 14:1492.098 download
#50asmslCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel02/24/2017 17:4792.076 download
#51without_AMBeijing University of Posts and Telecommunications04/28/2019 01:2792.06 download
#52test_attUVA12/17/2018 22:5292.032 download
#53Chuanhu_WTA_UNet3DBeijing University of Posts and Telecommunication10/18/2019 12:4192 download
#542cUNetUVA09/23/2018 14:4691.918 download
#55testtest10/31/2018 01:5991.897 download
#56FC-DENSENET_GDLBoston Children's Hospital06/23/2018 12:5991.817 download
#57vandy_test_1Vanderbilt University02/18/2019 21:2991.8 download
#58WTA1Beijing University of Posts and Telecommunications04/07/2019 03:3691.774 download
#59BrazIstituto Italiano di Tecnologia05/09/2018 21:0291.735 download
#60PAVISIstituto Italiano di Tecnologia09/25/2018 15:5491.73 download
#61PAVISIstituto Italiano di Tecnologia09/26/2018 09:3391.649 download
#62miplabtestTel-Aviv University12/02/2018 06:0491.633 download
#633DUNetBeijing University of Posts and Telecommunication10/18/2019 13:2491.626 download
#64ArchiveTUM11/18/2019 05:5791.561 download
#65miplab_testTel-Aviv University12/02/2018 04:5491.547 download
#66ArchiveTUM12/08/2019 06:1991.541 download
#67MIPLABTel-Aviv University11/03/2018 05:3891.539 download
#68uva_test_0818UVA08/18/2018 22:1691.53 download
#69ArchiveTUM12/10/2019 12:5891.528 download
#70IMAGINEBoston Children's Hospital04/12/2018 12:4191.523 download
#71BrazIstituto Italiano di Tecnologia (PAVIS)06/10/2018 11:1591.521 download
#72BrazIstituto Italiano di Tecnologia (PAVIS)06/10/2018 11:3691.503 download
#73test01_01_nicvicoroborgUniversity of Girona09/16/2018 10:0891.465 download
#74testdataorgUniversity of Girona09/16/2018 10:0591.465 download
#75nic_vicorob_testInstitut de Recerca en Visió per Computador i Robòtica,Universitat de Girona02/22/2017 10:4291.44 download
#76plain_unetCornell University11/15/2019 04:2891.429 download
#77output_10_24_16_46University10/24/2019 16:4791.409 download
#783DUNetBeijing University of Posts and Telecommunication10/18/2019 13:2991.387 download
#79VIC_TF_FULLUniversity of Girona, Spain05/02/2017 12:2891.331 download
#80eth_up1bitcoin11/27/2019 10:2091.32 download
#81vtest5Vanderbilt University02/11/2019 21:4491.296 download
#82NewGenAllUniversity of Girona11/21/2018 13:1091.277 download
#83MIPLAB_v3Department of Electrical Engineering, Tel-Aviv University08/13/2016 17:2691.267 download
#84Chuanhu_WATBeijing University of Posts and Telecommunication06/07/2019 11:0691.261 download
#85DeepTommyfritz02/15/2019 06:3191.249 download
#86eth_dropbitcoin11/27/2019 04:4691.231 download
#87output_10_26_9_41University10/26/2019 09:4191.218 download
#88output_01University10/22/2019 10:1991.218 download
#89ISBIAllAugCCUniversity of Girona11/27/2018 10:2391.206 download
#90vtest4Vanderbilt University02/11/2019 21:2391.159 download
#91CNet2Beijing University of Posts and Telecommunication05/08/2019 05:2291.088 download
#92udgvicorob_4modUniversity of Girona, Spain04/24/2019 11:3791.019 download
#93miac_resultsCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel12/09/2016 15:2291.011 download
#94testpim PIM Research Center, France09/04/2019 18:2991.002 download
#95output_10_26_9_26University10/26/2019 09:2690.996 download
#96IMAGINE2Boston Children's Hospital05/14/2018 11:3490.981 download
#97output_10_24_16_38University10/24/2019 16:3890.974 download
#98vtest8Vanderbilt University02/12/2019 01:2490.962 download
#99WTA_V2Beijing University of Posts and Telecommunications04/28/2019 06:4290.944 download
#100DeepTommy2fritz02/15/2019 08:2390.933 download
#101vtest7Vanderbilt University02/12/2019 01:0990.903 download
#102no_t1_7_epochImaging_Lab09/11/2018 20:4190.887 download
#103unetGN8Cornell University11/17/2019 02:1790.877 download
#104seg_5University10/21/2019 23:2090.816 download
#105vtest6Vanderbilt University02/12/2019 00:0990.781 download
#106eth_upbitcoin11/27/2019 06:4590.771 download
#107NIC_VICOROB_rater2University of Girona, Spain02/22/2017 10:5990.729 download
#108GINRIA_Model0211/17/2018 10:4890.714 download
#109PVG1Centre For Intelligent Machines, McGill University11/04/2016 11:2990.698 download
#110output_segCornell University11/15/2019 04:1490.629 download
#111testpim PIM Research Center, France09/05/2019 04:1490.624 download
#112GINRIA_Model0302/27/2018 08:3590.615 download
#113vallina_unet_unionCornell University11/15/2019 04:5090.611 download
#114CNet2Beijing University of Posts and Telecommunication05/08/2019 21:2690.599 download
#115predTechnical University of Munich11/30/2019 11:1290.577 download
#116ENIS_ATMSAdvanced Technologies For Medicine and Signals,ENIS, Sfax,Tunisia04/24/2017 04:4590.572 download
#117best_predictionsTechnical University of Munich12/01/2019 09:5990.57 download
#118vtest3Vanderbilt University02/11/2019 16:5390.549 download
#119output_10_26_9_05University10/26/2019 09:0590.51 download
#120pred_newTechnical University of Munich11/30/2019 11:2790.475 download
#121unetNorthwestern Polytechnical University01/18/2020 06:3690.443 download
#122resNorthwestern Polytechnical University01/06/2020 21:2790.443 download
#123GINRIA_Model2701/22/2019 06:2190.358 download
#124test01_01_nicvicorobgenUniversity of Girona09/16/2018 10:0290.333 download
#125VICOROB_OSL_03_01University of Girona, Spain04/30/2018 11:2990.327 download
#126FLAIR_PD_7_epochImaging_Lab09/27/2018 20:0190.324 download
#127vtest1Vanderbilt University02/11/2019 02:3490.313 download
#128IMIInstitute of Medical Informatics, University of Lübeck11/04/2016 10:1890.283 download
#129testpim03002 PIM Research Center, France09/03/2019 09:1990.27 download
#130testingResultsUS Naval Academy12/04/2018 18:5990.241 download
#131vtest2Vanderbilt University02/11/2019 14:0990.227 download
#132resNorthwestern Polytechnical University01/18/2020 07:0290.208 download
#133GINRIA_Model27_bis01/21/2019 16:4790.179 download
#134seg_6University10/22/2019 09:5290.173 download
#135ATMSEcole Nationale d'Ingénieurs de Sfax09/11/2016 11:5990.17 download
#136unetNorthwestern Polytechnical University01/19/2020 09:4590.149 download
#137GINRIA_Model2512/13/2018 11:3490.103 download
#138modmdgCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel02/22/2017 11:3190.084 download
#139test_MIPLAB_v2Dept of Biomedical Engineering, Tel-Aviv University06/12/2016 02:2790.07 download
#140ISBI02AugCCUniversity of Girona11/22/2018 09:5090.045 download
#141output_10_24_16_25University10/24/2019 16:2690.029 download
#142output_10_26_9_17University10/26/2019 09:1790.023 download
#143pred_submissionBioclinica08/24/2018 20:0490.021 download
#144GINRIA_Model27orig01/21/2019 14:0090.02 download
#145FLAIR_only_7_epochImaging_Lab09/27/2018 19:5790.006 download
#146predTechnical University of Munich12/15/2019 10:2989.938 download
#147predictions3Technical University of Munich11/30/2019 10:5889.925 download
#148testdataJHU06/28/2018 14:5389.867 download
#149ISBI02AugFFUniversity of Girona11/22/2018 10:1189.855 download
#150testdataistituto italiano di tecnologia (IIT)10/12/2017 05:4089.849 download
#151testdata_ATMS_ENISEcole Nationale d'Ingénieurs de Sfax01/12/2017 08:3589.844 download
#152ISBI02AugAUniversity of Girona11/21/2018 14:2989.827 download
#153test01_01_IMAGINEBoston Children's Hospital04/12/2018 12:3289.824 download
#154testdataBoston Children's Hospital04/12/2018 11:5589.824 download
#155VISAGES2VisAGeS, INRIA11/04/2016 12:0289.807 download
#156GEN4ModalityUniversity of Girona10/03/2018 06:0189.8 download
#157DenseNetUVA11/20/2018 12:1589.753 download
#158Aug_64Student04/28/2019 20:1489.719 download
#159ISBI02AugBUniversity of Girona11/21/2018 16:4289.683 download
#160ISBI02AugCUniversity of Girona11/21/2018 17:3889.675 download
#161GINRIA_Model27_bis01/22/2019 06:4989.67 download
#162test01_01_PAVISistituto italiano di tecnologia (IIT)10/12/2017 05:4389.617 download
#163MoneroBitcoin University11/28/2019 06:1589.598 download
#164pim_03_001 PIM Research Center, France09/03/2019 09:3289.591 download
#165CNN_CRF_reader1Imaging_Lab08/27/2018 15:2589.567 download
#166Chuanhu_WTA_CCNet1Beijing University of Posts and Telecommunication05/06/2019 08:5289.559 download
#167Chuanhu_WTA_CCNet.niiBeijing University of Posts and Telecommunication05/06/2019 02:1989.559 download
#168ISBI03AugCCUniversity of Girona11/23/2018 08:5689.549 download
#169ISBI01AugCCUniversity of Girona11/23/2018 04:1789.541 download
#170output_10_24_15_38University10/24/2019 15:3989.371 download
#171deepertommyfritz03/02/2019 12:1089.273 download
#172testdataNorthwestern Polytechnical University01/02/2020 00:2389.248 download
#173unetNorthwestern Polytechnical University01/19/2020 10:0789.222 download
#174DA02University of Girona09/26/2018 09:3289.218 download
#175IITBiomedical Imaging Lab, Indian Institute of Technlogy11/04/2016 10:0289.159 download
#176smartdspXiamen University12/26/2019 05:3489.104 download
#177teamfritz04/29/2019 12:3089.086 download
#178DA01University of Girona09/24/2018 06:3989.066 download
#179smartdspXiamen University01/15/2020 06:5189.054 download
#180output_10_26_10_04University10/26/2019 10:0589.024 download
#181testStudent01/14/2019 20:2388.913 download
#182mixStudent07/08/2019 00:0788.908 download
#183GINRIA_Model0311/17/2018 10:4988.902 download
#184seg_1University10/15/2019 09:1488.872 download
#185TrainGenTestOrgUniversity of Girona11/15/2018 04:0588.87 download
#186test01_01_DEEPU_resize2Student01/14/2019 21:0288.85 download
#187unet_2Student01/14/2019 21:0088.85 download
#188deep_unetStudent01/14/2019 20:3888.817 download
#189ranger_native_withStruct_smoothed_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:0488.8 download
#190MSMETRIXicometrix11/04/2016 11:2288.744 download
#191ORG03University of Girona09/27/2018 08:2188.673 download
#192ISBI05AugCCUniversity of Girona11/23/2018 08:3888.663 download
#193ranger_native_smoothed_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5688.624 download
#194ORG02University of Girona09/26/2018 09:1888.617 download
#195testdatagenUniversity of Girona09/16/2018 09:5688.567 download
#196dl_reader1Imaging_Lab05/16/2018 10:5188.527 download
#197densyfritz04/29/2019 13:3588.478 download
#198unet_reader1_flair_only_ppBioclinica05/15/2018 18:5988.476 download
#199lToadsImage Analysis and Communications Laboratory, Johns Hopkins University11/04/2016 10:2888.465 download
#200seg_3University10/21/2019 11:3188.433 download
#201densy2fritz04/29/2019 14:3888.433 download
#202ranger_native_filtered_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5888.426 download
#203finchfritz04/30/2019 04:4788.425 download
#2043Student06/03/2019 19:5888.41 download
#2052Student04/25/2019 23:5688.41 download
#2061Student04/25/2019 23:4888.41 download
#207CNN_reader2Bioclinica05/16/2018 01:3488.404 download
#208ranger_native_nopd_filtered_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:2788.364 download
#209ranger_native_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:0388.343 download
#210ranger_native_nopd_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:3588.335 download
#211ranger_native_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5588.272 download
#212test01_01_zengwhXiamen University09/08/2019 04:1688.255 download
#213test_dataXiamen University09/08/2019 04:1488.255 download
#21464_2Student05/05/2019 22:3288.217 download
#215origStudent07/07/2019 23:5888.176 download
#216seg_4University10/21/2019 21:0088.139 download
#217DA04University of Girona09/27/2018 08:5488.139 download
#218dl_lth_reader1Imaging_Lab05/16/2018 16:0588.131 download
#219ranger_native_nopd_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:3488.123 download
#220seg_2University10/15/2019 22:5788.084 download
#221Mediaire_Lesion_test_20180906mediaire/development09/06/2018 11:2888.08 download
#222MSMETRIXicometrix05/19/2016 12:1188.068 download
#223ranger_native_nopd_filtered_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5888.039 download
#224ORG05University of Girona09/27/2018 09:0188.022 download
#225CMICTranslational Imaging Group, CMIC, UCL11/04/2016 09:3288.009 download
#226MORFImage Analysis and Communications Laboratory, Johns Hopkins University11/04/2016 10:3787.917 download
#227mama_bazookafritz07/05/2019 18:1587.895 download
#228LesionChallengeTest_20181003DKFZ10/03/2018 07:1587.829 download
#229output_10_26_8_53University10/26/2019 08:5487.827 download
#230DA03University of Girona09/27/2018 08:3787.811 download
#231testdata_kulKU Leuven10/14/2016 16:1587.748 download
#232unet_reader1_flair_onlyBioclinica05/12/2018 14:3087.747 download
#233MIMoSA_PSUPenn09/19/2017 10:1587.715 download
#23432Student04/29/2019 02:2887.708 download
#235testDTU03/19/2019 03:1487.699 download
#236ATMSAdvanced Technologies For Medicine and Signals,ENIS, Sfax,Tunisia09/09/2017 14:1387.69 download
#237ORG01University of Girona09/24/2018 06:3287.613 download
#238MIMoSA_SUPenn09/12/2017 16:2287.57 download
#239MIMoSA_1UPenn09/12/2017 16:2387.479 download
#240MIMoSA_2UPenn09/12/2017 16:2387.398 download
#241TIG-BFTranslational Imaging Group, CMIC, UCL11/04/2016 11:5487.376 download
#242GINRIA_Model2011/17/2018 11:5687.366 download
#243GINRIA_Model0102/20/2018 04:5287.31 download
#244unet_reader_1_no_valBioclinica05/14/2018 18:1887.303 download
#245unet_reader2_flair_onlyBioclinica05/12/2018 14:4987.242 download
#246predicted_masks_niiblah05/11/2018 22:4487.242 download
#247unet_reader_2_no_valBioclinica05/14/2018 23:2887.15 download
#248CRLComputational Radiology Laboratory, Boston Children's Hospital11/04/2016 09:4187.017 download
#249unet_readers_1_and_2_separate_flair_onlyBioclinica05/14/2018 01:5086.965 download
#250DIAGDiagnostic Image Analysis Group, Radboud University Medical Center11/04/2016 09:4986.916 download
#251test1Beijing University of Posts and Telecommunications04/28/2019 02:1286.903 download
#252MIALSFU09/17/2019 08:2786.653 download
#253unet_readers_1_and_2_flair_onlyBioclinica05/12/2018 21:4986.578 download
#254DA05University of Girona09/27/2018 09:0786.506 download
#255TIGTranslational Imaging Group, CMIC, UCL11/04/2016 11:3886.436 download
#256zilliqaBitcoin University11/28/2019 06:1286.194 download
#257mediaire_v2mediaire/development02/14/2019 10:1586.112 download
#258VISAGES3VisAGeS, INRIA11/04/2016 12:4386.068 download
#259ORG04University of Girona09/27/2018 08:4685.974 download
#260tommy_denserfritz04/29/2019 06:4885.271 download
#261uva_testUVA08/16/2018 22:5884.727 download
#262BAUMIPVisAGeS, INRIA11/04/2016 09:2384.14 download