Lesion Challenge

Reference: Longitudinal multiple sclerosis lesion segmentation: Resource and challenge
Carass A, Roy S, Jog A, Cuzzocreo JL, Magrath E, Gherman A, Button J, Nguyen J, Prados F, Sudre CH, Jorge Cardoso M, Cawley N, Ciccarelli O, Wheeler-Kingshott CA, Ourselin S, Catanese L, Deshpande H, Maurel P, Commowick O, Barillot C, Tomas-Fernandez X, Warfield SK, Vaidya S, Chunduru A, Muthuganapathy R, Krishnamurthi G, Jesson A, Arbel T, Maier O, Handels H, Iheme LO, Unay D, Jain S, Sima DM, Smeets D, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Bazin PL, Calabresi PA, Crainiceanu CM, Ellingsen LM, Reich DS, Prince JL, Pham DL.
Neuroimage. 2017 Mar 1;148:77-102. doi: 10.1016/j.neuroimage.2016.12.064. Epub 2017 Jan 11. (paper link)

The Longitudinal MS Lesion Segmentation Challenge was conducted at the 2015 International Symposium on Biomedical Imaging in New York, NY, April 16-19. Competing teams applied their automatic lesion segmentation algorithms to MR neuroimaging data acquired at multiple time points from MS patients. Algorithms were evaluated against manual segmentations from multiple raters in terms of their segmentation accuracy and ability to track lesion evolution.

This work was partially supported by funding from the National Institute of Neurological Disorders and Stroke (R01-NS070906) and the National Multiple Sclerosis Society (RG-1507-05243).

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RankSubmitted byAffiliationSubmission DateScoreDownload results
#1IMAGINE_2Boston Children's Hospital06/19/2018 16:4892.486 download
#2dropUNetUVA10/03/2018 11:0392.405 download
#3UNet_v3UVA08/23/2018 09:3892.402 download
#4uva_unetUVA08/19/2018 17:4292.344 download
#5DuNetUVA08/22/2018 09:5292.327 download
#6testtest10/31/2018 01:5592.227 download
#7UnigeUniversity of Genova10/31/2018 01:4592.184 download
#8UnigeUniversity of Genova10/31/2018 04:0392.118 download
#9PAVISIstituto Italiano di Tecnologia09/25/2018 14:3492.108 download
#10asmslCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel02/24/2017 17:4792.076 download
#11test_attUVA12/17/2018 22:5292.032 download
#122cUNetUVA09/23/2018 14:4691.918 download
#13testtest10/31/2018 01:5991.897 download
#14FC-DENSENET_GDLBoston Children's Hospital06/23/2018 12:5991.817 download
#15BrazIstituto Italiano di Tecnologia05/09/2018 21:0291.735 download
#16PAVISIstituto Italiano di Tecnologia09/25/2018 15:5491.73 download
#17PAVISIstituto Italiano di Tecnologia09/26/2018 09:3391.649 download
#18miplabtestTel-Aviv University12/02/2018 06:0491.633 download
#19miplab_testTel-Aviv University12/02/2018 04:5491.547 download
#20MIPLABTel-Aviv University11/03/2018 05:3891.539 download
#21uva_test_0818UVA08/18/2018 22:1691.53 download
#22IMAGINEBoston Children's Hospital04/12/2018 12:4191.523 download
#23BrazIstituto Italiano di Tecnologia (PAVIS)06/10/2018 11:1591.521 download
#24BrazIstituto Italiano di Tecnologia (PAVIS)06/10/2018 11:3691.503 download
#25test01_01_nicvicoroborgUniversity of Girona09/16/2018 10:0891.465 download
#26testdataorgUniversity of Girona09/16/2018 10:0591.465 download
#27nic_vicorob_testInstitut de Recerca en Visió per Computador i Robòtica,Universitat de Girona02/22/2017 10:4291.44 download
#28VIC_TF_FULLUniversity of Girona, Spain05/02/2017 12:2891.331 download
#29NewGenAllUniversity of Girona11/21/2018 13:1091.277 download
#30MIPLAB_v3Department of Electrical Engineering, Tel-Aviv University08/13/2016 17:2691.267 download
#31ISBIAllAugCCUniversity of Girona11/27/2018 10:2391.206 download
#32miac_resultsCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel12/09/2016 15:2291.011 download
#33IMAGINE2Boston Children's Hospital05/14/2018 11:3490.981 download
#34no_t1_7_epochImaging_Lab09/11/2018 20:4190.887 download
#35NIC_VICOROB_rater2University of Girona, Spain02/22/2017 10:5990.729 download
#36GINRIA_Model0211/17/2018 10:4890.714 download
#37PVG1Centre For Intelligent Machines, McGill University11/04/2016 11:2990.698 download
#38GINRIA_Model0302/27/2018 08:3590.615 download
#39ENIS_ATMSAdvanced Technologies For Medicine and Signals,ENIS, Sfax,Tunisia04/24/2017 04:4590.572 download
#40test01_01_nicvicorobgenUniversity of Girona09/16/2018 10:0290.333 download
#41VICOROB_OSL_03_01University of Girona, Spain04/30/2018 11:2990.327 download
#42FLAIR_PD_7_epochImaging_Lab09/27/2018 20:0190.324 download
#43IMIInstitute of Medical Informatics, University of Lübeck11/04/2016 10:1890.283 download
#44testingResultsUS Naval Academy12/04/2018 18:5990.241 download
#45ATMSEcole Nationale d'Ingénieurs de Sfax09/11/2016 11:5990.17 download
#46GINRIA_Model2512/13/2018 11:3490.103 download
#47modmdgCenter for medical Image Analysis & Navigation (CIAN), Department of Biomedical Engineering, University of Basel02/22/2017 11:3190.084 download
#48test_MIPLAB_v2Dept of Biomedical Engineering, Tel-Aviv University06/12/2016 02:2790.07 download
#49ArchiveMcGill University03/22/2017 00:0090.054 download
#50ISBI02AugCCUniversity of Girona11/22/2018 09:5090.045 download
#51pred_submissionBioclinica08/24/2018 20:0490.021 download
#52FLAIR_only_7_epochImaging_Lab09/27/2018 19:5790.006 download
#53testdataJHU06/28/2018 14:5389.867 download
#54ISBI02AugFFUniversity of Girona11/22/2018 10:1189.855 download
#55testdataistituto italiano di tecnologia (IIT)10/12/2017 05:4089.849 download
#56testdata_ATMS_ENISEcole Nationale d'Ingénieurs de Sfax01/12/2017 08:3589.844 download
#57ISBI02AugAUniversity of Girona11/21/2018 14:2989.827 download
#58test01_01_IMAGINEBoston Children's Hospital04/12/2018 12:3289.824 download
#59testdataBoston Children's Hospital04/12/2018 11:5589.824 download
#60VISAGES2VisAGeS, INRIA11/04/2016 12:0289.807 download
#61GEN4ModalityUniversity of Girona10/03/2018 06:0189.8 download
#62DenseNetUVA11/20/2018 12:1589.753 download
#63ISBI02AugBUniversity of Girona11/21/2018 16:4289.683 download
#64ISBI02AugCUniversity of Girona11/21/2018 17:3889.675 download
#65test01_01_PAVISistituto italiano di tecnologia (IIT)10/12/2017 05:4389.617 download
#66CNN_CRF_reader1Imaging_Lab08/27/2018 15:2589.567 download
#67ISBI03AugCCUniversity of Girona11/23/2018 08:5689.549 download
#68ISBI01AugCCUniversity of Girona11/23/2018 04:1789.541 download
#69DA02University of Girona09/26/2018 09:3289.218 download
#70IITBiomedical Imaging Lab, Indian Institute of Technlogy11/04/2016 10:0289.159 download
#71DA01University of Girona09/24/2018 06:3989.066 download
#72testStudent01/14/2019 20:2388.913 download
#73GINRIA_Model0311/17/2018 10:4988.902 download
#74TrainGenTestOrgUniversity of Girona11/15/2018 04:0588.87 download
#75test01_01_DEEPU_resize2Student01/14/2019 21:0288.85 download
#76unet_2Student01/14/2019 21:0088.85 download
#77deep_unetStudent01/14/2019 20:3888.817 download
#78ranger_native_withStruct_smoothed_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:0488.8 download
#79MSMETRIXicometrix11/04/2016 11:2288.744 download
#80ORG03University of Girona09/27/2018 08:2188.673 download
#81ISBI05AugCCUniversity of Girona11/23/2018 08:3888.663 download
#82ranger_native_smoothed_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5688.624 download
#83ORG02University of Girona09/26/2018 09:1888.617 download
#84testdatagenUniversity of Girona09/16/2018 09:5688.567 download
#85dl_reader1Imaging_Lab05/16/2018 10:5188.527 download
#86unet_reader1_flair_only_ppBioclinica05/15/2018 18:5988.476 download
#87lToadsImage Analysis and Communications Laboratory, Johns Hopkins University11/04/2016 10:2888.465 download
#88ranger_native_filtered_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5888.426 download
#89CNN_reader2Bioclinica05/16/2018 01:3488.404 download
#90ranger_native_nopd_filtered_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:2788.364 download
#91ranger_native_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:0388.343 download
#92ranger_native_nopd_withStruct_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:3588.335 download
#93ranger_native_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5588.272 download
#94ArchiveJohns Hopkins Bloomberg School of Public Health11/27/2018 18:2888.272 download
#95DA04University of Girona09/27/2018 08:5488.139 download
#96dl_lth_reader1Imaging_Lab05/16/2018 16:0588.131 download
#97ranger_native_nopd_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:3488.123 download
#98Mediaire_Lesion_test_20180906mediaire/development09/06/2018 11:2888.08 download
#99MSMETRIXicometrix05/19/2016 12:1188.068 download
#100ranger_native_nopd_filtered_predJohns Hopkins Bloomberg School of Public Health12/22/2018 14:5888.039 download
#101ORG05University of Girona09/27/2018 09:0188.022 download
#102CMICTranslational Imaging Group, CMIC, UCL11/04/2016 09:3288.009 download
#103MORFImage Analysis and Communications Laboratory, Johns Hopkins University11/04/2016 10:3787.917 download
#104LesionChallengeTest_20181003DKFZ10/03/2018 07:1587.829 download
#105DA03University of Girona09/27/2018 08:3787.811 download
#106testdata_kulKU Leuven10/14/2016 16:1587.748 download
#107unet_reader1_flair_onlyBioclinica05/12/2018 14:3087.747 download
#108MIMoSA_PSUPenn09/19/2017 10:1587.715 download
#109ATMSAdvanced Technologies For Medicine and Signals,ENIS, Sfax,Tunisia09/09/2017 14:1387.69 download
#110ORG01University of Girona09/24/2018 06:3287.613 download
#111MIMoSA_SUPenn09/12/2017 16:2287.57 download
#112MIMoSA_1UPenn09/12/2017 16:2387.479 download
#113MIMoSA_2UPenn09/12/2017 16:2387.398 download
#114TIG-BFTranslational Imaging Group, CMIC, UCL11/04/2016 11:5487.376 download
#115GINRIA_Model2011/17/2018 11:5687.366 download
#116GINRIA_Model0102/20/2018 04:5287.31 download
#117unet_reader_1_no_valBioclinica05/14/2018 18:1887.303 download
#118unet_reader2_flair_onlyBioclinica05/12/2018 14:4987.242 download
#119predicted_masks_niiblah05/11/2018 22:4487.242 download
#120unet_reader_2_no_valBioclinica05/14/2018 23:2887.15 download
#121CRLComputational Radiology Laboratory, Boston Children's Hospital11/04/2016 09:4187.017 download
#122unet_readers_1_and_2_separate_flair_onlyBioclinica05/14/2018 01:5086.965 download
#123DIAGDiagnostic Image Analysis Group, Radboud University Medical Center11/04/2016 09:4986.916 download
#124unet_readers_1_and_2_flair_onlyBioclinica05/12/2018 21:4986.578 download
#125DA05University of Girona09/27/2018 09:0786.506 download
#126TIGTranslational Imaging Group, CMIC, UCL11/04/2016 11:3886.436 download
#127VISAGES3VisAGeS, INRIA11/04/2016 12:4386.068 download
#128ORG04University of Girona09/27/2018 08:4685.974 download
#129uva_testUVA08/16/2018 22:5884.727 download
#130BAUMIPVisAGeS, INRIA11/04/2016 09:2384.14 download